# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_1 - 199 RepC PF06504.6 283 1e-95 309.5 0.1 1 1 1.1e-96 1.1e-95 309.3 0.1 100 282 1 182 1 183 0.97 # 3 # 599 # 1 # ID=2_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.616 1_3 - 288 AAA_25 PF13481.1 194 8.6e-44 138.9 0.1 1 1 1.3e-44 1.3e-43 138.3 0.1 13 193 7 183 4 184 0.89 # 1446 # 2309 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/41b100b5-656d-4905-bf4e-4097c1454be8 # Target file: checkm_output/bins/pm1014/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1014/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/41b100b5-656d-4905-bf4e-4097c1454be8 checkm_output/bins/pm1014/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:32:09 2017 # [ok]