#                                                               --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name           accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
RNA_helicase         PF00910.22 AAFJ01000010_00093   -            1.6e-05   16.0   0.0   5.7e-05   14.2   0.0   2.0   2   0   0   2   2   2   1 RNA helicase
RNA_helicase         PF00910.22 AAFL01000016_00026   -            0.00017   12.7   0.0   0.00098   10.2   0.0   2.2   2   0   0   2   2   2   1 RNA helicase
MobA_MobL            PF03389.15 AAFL01000016_00027   -              5e-82  265.5   0.0   1.9e-81  263.6   0.0   1.9   2   0   0   2   2   2   1 MobA/MobL family
RNA_helicase         PF00910.22 AAFL01000021_00004   -            7.3e-05   13.9   0.0   0.00013   13.1   0.0   1.5   1   0   0   1   1   1   1 RNA helicase
HTH_24               PF13412.6  AAFL01000021_00009   -            9.4e-07   19.1   0.2   1.2e-06   18.7   0.2   1.2   1   0   0   1   1   1   1 Winged helix-turn-helix DNA-binding
HTH_24               PF13412.6  AJ489618_00004       -            0.00013   12.3   0.3   0.00019   11.7   0.3   1.3   1   0   0   1   1   1   1 Winged helix-turn-helix DNA-binding
RNA_helicase         PF00910.22 AVFM02000074_00004   -            4.8e-05   14.4   0.0   0.00014   13.0   0.0   1.8   2   0   0   2   2   2   1 RNA helicase
RNA_helicase         PF00910.22 AY190287_00001       -            4.9e-05   14.4   0.0   0.00014   13.0   0.0   1.8   2   0   0   2   2   2   1 RNA helicase
RNA_helicase         PF00910.22 AY701528_00008       -            0.00011   13.3   0.0   0.00021   12.4   0.0   1.5   1   0   0   1   1   1   1 RNA helicase
RNA_helicase         PF00910.22 AY701528_00016       -            2.3e-08   25.1   0.4   6.3e-07   20.5   0.0   2.3   2   0   0   2   2   2   1 RNA helicase
RNA_helicase         PF00910.22 AY701528_00019       -              9e-05   13.6   0.0   0.00016   12.8   0.0   1.5   1   0   0   1   1   1   1 RNA helicase
RNA_helicase         PF00910.22 CP013735_00025       -            4.8e-05   14.4   0.0   0.00014   13.0   0.0   1.8   2   0   0   2   2   2   1 RNA helicase
RNA_helicase         PF00910.22 CP020480_00022       -            1.6e-05   16.0   0.0   5.7e-05   14.2   0.0   2.0   2   0   0   2   2   2   1 RNA helicase
#
# Program:         hmmscan
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SCAN
# Query file:      total.faa
# Target file:     /home/depict/plasmidtyping/plasmid_replicons.hmm
# Option settings: hmmscan --tblout total_rep_table.txt --domtblout total_rep_domtbl.txt --acc --cpu 16 /home/depict/plasmidtyping/plasmid_replicons.hmm total.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/Campylobacter_plasmids_Linda/cleanedup/nohit
# Date:            Mon Sep 27 11:28:15 2021
# [ok]