# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RNA_helicase PF00910.22 AAFJ01000010_00093 - 1.6e-05 16.0 0.0 5.7e-05 14.2 0.0 2.0 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 AAFL01000016_00026 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase MobA_MobL PF03389.15 AAFL01000016_00027 - 5e-82 265.5 0.0 1.9e-81 263.6 0.0 1.9 2 0 0 2 2 2 1 MobA/MobL family RNA_helicase PF00910.22 AAFL01000021_00004 - 7.3e-05 13.9 0.0 0.00013 13.1 0.0 1.5 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 AAFL01000021_00009 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 AANQ01000006_00029 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 AJ489618_00004 - 0.00013 12.3 0.3 0.00019 11.7 0.3 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 AVFM02000074_00004 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 AY190287_00001 - 4.9e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 AY394560_00041 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 AY394561_00043 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 AY701528_00008 - 0.00011 13.3 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 AY701528_00016 - 2.3e-08 25.1 0.4 6.3e-07 20.5 0.0 2.3 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 AY701528_00019 - 9e-05 13.6 0.0 0.00016 12.8 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 AY714214_00031 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CM007863_00016 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CM007865_00012 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 CM007865_00039 - 3.2e-06 17.4 0.1 2e-05 14.9 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP000549_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP004067_00045 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 CP004067_00063 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 CP007180_00014 - 9.8e-06 15.8 0.0 0.00013 12.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP007180_00044 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 CP007750_00017 - 9.8e-06 15.8 0.0 0.00013 12.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP007750_00040 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP010073_00032 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 CP010073_00054 - 1e-05 15.8 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP011017_00010 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 CP013033_00009 - 6.2e-06 16.5 0.0 8.3e-05 12.9 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP013033_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP013035_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 CP013037_00030 - 6.2e-06 16.5 0.0 8.3e-05 12.9 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP013037_00047 - 5.1e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 CP013117_00059 - 1.9e-05 14.9 0.0 2.9e-05 14.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP013117_00060 - 0.00014 13.0 0.2 0.00053 11.1 0.0 2.2 2 1 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 CP013117_00064 - 0.0002 11.7 0.9 0.00088 9.6 0.1 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP013117_00094 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP013735_00025 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 CP014345_00055 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP014743_00056 - 4.9e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 CP014743_00083 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_24 PF13412.6 CP014743_00111 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP014745_00051 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 CP014745_00078 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_24 PF13412.6 CP014745_00106 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP017026_00004 - 6.8e-05 14.0 0.0 0.00013 13.1 0.0 1.5 1 0 0 1 1 1 1 RNA helicase MobA_MobL PF03389.15 CP017026_00010 - 5e-82 265.5 0.0 1.9e-81 263.6 0.0 1.9 2 0 0 2 2 2 1 MobA/MobL family RNA_helicase PF00910.22 CP017026_00011 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP017026_00112 - 6e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RepL PF05732.11 CP017026_00128 - 6.9e-20 61.8 0.0 8e-20 61.6 0.0 1.0 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_24 PF13412.6 CP017026_00195 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP017230_00045 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 CP017417_00028 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_24 PF13412.6 CP017418_00004 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP017418_00031 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP017854_00025 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP017857_00040 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP018901_00004 - 6.3e-05 14.1 0.0 0.00012 13.2 0.0 1.5 1 0 0 1 1 1 1 RNA helicase MobA_MobL PF03389.15 CP018901_00010 - 4.6e-53 170.8 0.0 5.3e-53 170.6 0.0 1.0 1 0 0 1 1 1 1 MobA/MobL family RNA_helicase PF00910.22 CP018901_00011 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 CP018901_00134 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 CP020480_00022 - 1.6e-05 16.0 0.0 5.7e-05 14.2 0.0 2.0 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP020775_00040 - 6e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 CP022078_00021 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP022471_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 CP023544_00040 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 CP023544_00059 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 CP023546_00033 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 CP023546_00051 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 KX686749_00010 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 KX686749_00037 - 6e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 KX686749_00051 - 2.6e-05 15.3 0.0 4.2e-05 14.6 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 MLDY01000008_00016 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 MLDZ01000009_00012 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 MLDZ01000009_00039 - 3.2e-06 17.4 0.1 2e-05 14.9 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 MUJW01000047_00040 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 NC_006134_00041 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 NC_006135_00043 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 NC_007141_00031 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 NC_008790_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 NC_022355_00045 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 NC_022355_00063 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pAAFJ01000010_00093 - 1.6e-05 16.0 0.0 5.7e-05 14.2 0.0 2.0 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pAAFL01000016_00026 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase MobA_MobL PF03389.15 pAAFL01000016_00027 - 5e-82 265.5 0.0 1.9e-81 263.6 0.0 1.9 2 0 0 2 2 2 1 MobA/MobL family RNA_helicase PF00910.22 pAAFL01000021_00004 - 7.3e-05 13.9 0.0 0.00013 13.1 0.0 1.5 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 pAAFL01000021_00009 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pAANQ01000006_00029 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 pAJ489618_00004 - 0.00013 12.3 0.3 0.00019 11.7 0.3 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pAVFM02000074_00004 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pAY190287_00001 - 4.9e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pAY394560_00041 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pAY394561_00043 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pAY701528_00008 - 0.00011 13.3 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pAY701528_00016 - 2.3e-08 25.1 0.4 6.3e-07 20.5 0.0 2.3 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pAY701528_00019 - 9e-05 13.6 0.0 0.00016 12.8 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pAY714214_00031 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCM007863_00016 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCM007865_00012 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCM007865_00039 - 3.2e-06 17.4 0.1 2e-05 14.9 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP000549_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP004067_00045 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pCP004067_00063 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 pCP007180_00014 - 9.8e-06 15.8 0.0 0.00013 12.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP007180_00044 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pCP007182_00037 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP007750_00017 - 9.8e-06 15.8 0.0 0.00013 12.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP007750_00040 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP007752_00047 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP010073_00032 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP010073_00054 - 1e-05 15.8 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP010302_00032 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP010302_00054 - 1e-05 15.8 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP011017_00010 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 pCP013033_00009 - 6.2e-06 16.5 0.0 8.3e-05 12.9 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP013033_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP013035_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP013037_00030 - 6.2e-06 16.5 0.0 8.3e-05 12.9 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP013037_00047 - 5.1e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP013117_00059 - 1.9e-05 14.9 0.0 2.9e-05 14.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP013117_00060 - 0.00014 13.0 0.2 0.00053 11.1 0.0 2.2 2 1 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP013117_00064 - 0.0002 11.7 0.9 0.00088 9.6 0.1 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP013117_00094 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP013735_00025 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP014345_00055 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP014743_00056 - 4.9e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP014743_00083 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_24 PF13412.6 pCP014743_00111 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP014745_00051 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP014745_00078 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_24 PF13412.6 pCP014745_00106 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP017026_00004 - 6.8e-05 14.0 0.0 0.00013 13.1 0.0 1.5 1 0 0 1 1 1 1 RNA helicase MobA_MobL PF03389.15 pCP017026_00010 - 5e-82 265.5 0.0 1.9e-81 263.6 0.0 1.9 2 0 0 2 2 2 1 MobA/MobL family RNA_helicase PF00910.22 pCP017026_00011 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP017026_00112 - 6e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RepL PF05732.11 pCP017026_00128 - 6.9e-20 61.8 0.0 8e-20 61.6 0.0 1.0 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_24 PF13412.6 pCP017026_00195 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP017230_00045 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP017417_00028 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_24 PF13412.6 pCP017418_00004 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP017418_00031 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP017854_00025 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP017857_00040 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP018901_00004 - 6.3e-05 14.1 0.0 0.00012 13.2 0.0 1.5 1 0 0 1 1 1 1 RNA helicase MobA_MobL PF03389.15 pCP018901_00010 - 4.6e-53 170.8 0.0 5.3e-53 170.6 0.0 1.0 1 0 0 1 1 1 1 MobA/MobL family RNA_helicase PF00910.22 pCP018901_00011 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pCP018901_00134 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pCP020480_00022 - 1.6e-05 16.0 0.0 5.7e-05 14.2 0.0 2.0 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP020775_00040 - 6e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pCP022078_00021 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP022471_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pCP023544_00040 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pCP023544_00059 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pCP023546_00033 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pCP023546_00051 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pGCA_000015525_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RHH_1 PF01402.21 pGCA_000015525_00057 - 0.00011 12.9 0.4 0.00032 11.4 0.3 2.0 1 1 0 1 1 1 1 Ribbon-helix-helix protein, copG family RNA_helicase PF00910.22 pGCA_000015525_00077 - 0.00011 13.3 0.1 0.0059 7.7 0.0 2.5 2 0 0 2 2 2 2 RNA helicase Rep_3 PF01051.21 pGCA_000015525_00079 - 1.8e-29 93.8 17.6 2.2e-29 93.5 17.6 1.0 1 0 0 1 1 1 1 Initiator Replication protein MobA_MobL PF03389.15 pGCA_000015525_00100 - 2.1e-05 15.0 8.8 7.7e-05 13.1 8.8 2.1 1 1 0 1 1 1 1 MobA/MobL family RNA_helicase PF00910.22 pGCA_000465235_00045 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pGCA_000465235_00063 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase Rep_3 PF01051.21 pGCA_000465235_00071 - 1.9e-44 142.7 17.1 1.9e-44 142.7 17.1 1.9 2 1 0 2 2 2 1 Initiator Replication protein RNA_helicase PF00910.22 pGCA_000583775_00037 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pGCA_000583795_00014 - 9.8e-06 15.8 0.0 0.00013 12.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pGCA_000583795_00044 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pGCA_001417635_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pGCA_001563565_00055 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pGCA_001587035_00056 - 4.9e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pGCA_001587035_00083 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_24 PF13412.6 pGCA_001587035_00111 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pGCA_001717605_00003 - 6.8e-05 14.0 0.0 0.00013 13.1 0.0 1.5 1 0 0 1 1 1 1 RNA helicase MobA_MobL PF03389.15 pGCA_001717605_00009 - 5e-82 265.5 0.0 1.9e-81 263.6 0.0 1.9 2 0 0 2 2 2 1 MobA/MobL family RNA_helicase PF00910.22 pGCA_001717605_00010 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pGCA_001717605_00111 - 6e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RepL PF05732.11 pGCA_001717605_00127 - 6.9e-20 61.8 0.0 8e-20 61.6 0.0 1.0 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_24 PF13412.6 pGCA_001717605_00195 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rep_3 PF01051.21 pGCA_001717605_00199 - 5e-41 131.5 16.1 5e-41 131.5 16.1 1.8 2 0 0 2 2 2 1 Initiator Replication protein Rep_3 PF01051.21 pGCA_001717605_00202 - 1.2e-44 143.4 10.2 2.1e-44 142.6 10.2 1.4 1 0 0 1 1 1 1 Initiator Replication protein HTH_24 PF13412.6 pGCA_001865595_00017 - 9.8e-06 15.8 0.0 0.00013 12.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pGCA_001865595_00040 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pGCA_001865615_00047 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pGCA_001936355_00004 - 6.3e-05 14.1 0.0 0.00012 13.2 0.0 1.5 1 0 0 1 1 1 1 RNA helicase MobA_MobL PF03389.15 pGCA_001936355_00010 - 4.6e-53 170.8 0.0 5.3e-53 170.6 0.0 1.0 1 0 0 1 1 1 1 MobA/MobL family RNA_helicase PF00910.22 pGCA_001936355_00011 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pGCA_001936355_00134 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pGCA_002101355_00040 - 6e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pGCA_002209045_00021 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pGCA_002214785_00045 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pGCA_002214785_00088 - 5.9e-05 14.2 0.0 0.00065 10.8 0.0 2.4 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pGCA_002234455_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pGCA_002407125_00040 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pGCA_002407125_00059 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pGCA_002407145_00033 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pGCA_002407145_00051 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pGCA_002407145_00076 - 5.5e-05 14.3 0.0 0.00058 11.0 0.0 2.4 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pKX686749_00010 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pKX686749_00037 - 6e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pKX686749_00051 - 2.6e-05 15.3 0.0 4.2e-05 14.6 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pMLDY01000008_00016 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pMLDZ01000009_00012 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pMLDZ01000009_00039 - 3.2e-06 17.4 0.1 2e-05 14.9 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pMUJW01000047_00040 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNC_006134_00041 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pNC_006135_00043 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNC_007141_00031 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNC_008790_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNC_022355_00045 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pNC_022355_00063 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pNZ_AAFJ01000010_00093 - 1.6e-05 16.0 0.0 5.7e-05 14.2 0.0 2.0 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_AAFL01000016_00026 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase MobA_MobL PF03389.15 pNZ_AAFL01000016_00027 - 5e-82 265.5 0.0 1.9e-81 263.6 0.0 1.9 2 0 0 2 2 2 1 MobA/MobL family RNA_helicase PF00910.22 pNZ_AAFL01000021_00004 - 7.3e-05 13.9 0.0 0.00013 13.1 0.0 1.5 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 pNZ_AAFL01000021_00009 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_AANQ01000006_00029 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pNZ_CM007863_00016 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CM007865_00012 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pNZ_CM007865_00039 - 3.2e-06 17.4 0.1 2e-05 14.9 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_24 PF13412.6 pNZ_CP007180_00014 - 9.8e-06 15.8 0.0 0.00013 12.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP007180_00044 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 pNZ_CP007750_00017 - 9.8e-06 15.8 0.0 0.00013 12.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP007750_00040 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP007752_00047 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP010073_00032 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pNZ_CP010073_00054 - 1e-05 15.8 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP010302_00032 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pNZ_CP010302_00054 - 1e-05 15.8 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP011017_00010 - 6.2e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase HTH_24 PF13412.6 pNZ_CP013033_00009 - 6.2e-06 16.5 0.0 8.3e-05 12.9 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP013033_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP013035_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pNZ_CP013037_00030 - 6.2e-06 16.5 0.0 8.3e-05 12.9 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP013037_00047 - 5.1e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pNZ_CP013117_00059 - 1.9e-05 14.9 0.0 2.9e-05 14.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP013117_00060 - 0.00014 13.0 0.2 0.00053 11.1 0.0 2.2 2 1 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pNZ_CP013117_00064 - 0.0002 11.7 0.9 0.00088 9.6 0.1 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP013117_00094 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP013735_00025 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pNZ_CP014345_00055 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP014743_00056 - 4.9e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pNZ_CP014743_00083 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_24 PF13412.6 pNZ_CP014743_00111 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP014745_00051 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pNZ_CP014745_00078 - 1e-05 15.7 0.0 0.00014 12.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_24 PF13412.6 pNZ_CP014745_00106 - 9.9e-07 19.0 0.2 1.2e-06 18.7 0.2 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP017026_00004 - 6.8e-05 14.0 0.0 0.00013 13.1 0.0 1.5 1 0 0 1 1 1 1 RNA helicase MobA_MobL PF03389.15 pNZ_CP017026_00010 - 5e-82 265.5 0.0 1.9e-81 263.6 0.0 1.9 2 0 0 2 2 2 1 MobA/MobL family RNA_helicase PF00910.22 pNZ_CP017026_00011 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP017026_00112 - 6e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RepL PF05732.11 pNZ_CP017026_00128 - 6.9e-20 61.8 0.0 8e-20 61.6 0.0 1.0 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_24 PF13412.6 pNZ_CP017026_00195 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP017230_00045 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP017854_00025 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP017857_00040 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP018901_00004 - 6.3e-05 14.1 0.0 0.00012 13.2 0.0 1.5 1 0 0 1 1 1 1 RNA helicase MobA_MobL PF03389.15 pNZ_CP018901_00010 - 4.6e-53 170.8 0.0 5.3e-53 170.6 0.0 1.0 1 0 0 1 1 1 1 MobA/MobL family RNA_helicase PF00910.22 pNZ_CP018901_00011 - 0.00017 12.7 0.0 0.00098 10.2 0.0 2.2 2 0 0 2 2 2 1 RNA helicase HTH_24 PF13412.6 pNZ_CP018901_00134 - 9.4e-07 19.1 0.2 1.2e-06 18.7 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RNA_helicase PF00910.22 pNZ_CP020480_00022 - 1.6e-05 16.0 0.0 5.7e-05 14.2 0.0 2.0 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP020775_00040 - 6e-05 14.1 0.0 0.00014 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP022078_00021 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP022471_00039 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP023544_00040 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP023544_00059 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP023546_00033 - 0.00012 13.2 0.0 0.00021 12.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pNZ_CP023546_00051 - 6.1e-05 14.1 0.0 0.00015 12.9 0.0 1.7 1 0 0 1 1 1 1 RNA helicase RNA_helicase PF00910.22 pNZ_MUJW01000047_00040 - 4.8e-05 14.4 0.0 0.00014 13.0 0.0 1.8 2 0 0 2 2 2 1 RNA helicase # # Program: hmmscan # Version: 3.1b2 (February 2015) # Pipeline mode: SCAN # Query file: total.faa # Target file: /home/depict/plasmidtyping/plasmid_replicons.hmm # Option settings: hmmscan --tblout total_table.txt --domtblout total_domtbl.txt --acc --cpu 16 /home/depict/plasmidtyping/plasmid_replicons.hmm total.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/Campylobacter/plasmids/nohit/faa # Date: Fri Nov 13 20:03:00 2020 # [ok]